WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C12.11.1 Sequence Name  T07C12.11.1
Length (nt)  1135   Chromosome Location  V: 9960747-9962494
Chromosome . Primary Identifier  V Chromosome Location . Start  9960747
Chromosome Location . End  9962494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C12.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011575 madf-4 T07C12.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C12.11 T07C12.11 990   V: 9960872-9961015

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C12.11.1 9960747 9962494 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194218   269   V: 9960747-9961015 Caenorhabditis elegans
Exon194219   186   V: 9961066-9961251 Caenorhabditis elegans
Exon194220   373   V: 9961298-9961670 Caenorhabditis elegans
Exon194221   307   V: 9962188-9962494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C12.11.1 9960747 9962494 -1

1 Sequence

Length
1135

1 Sequence Ontology Term

Identifier Name Description
transcript