WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H6.1a.1 Sequence Name  C27H6.1a.1
Length (nt)  5395   Chromosome Location  V: 9966380-9976238
Chromosome . Primary Identifier  V Chromosome Location . Start  9966380
Chromosome Location . End  9976238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006777 unc-41 C27H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H6.1a C27H6.1a 5082   V: 9966681-9966810

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.1a.1 9966380 9976238 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194224   431   V: 9966380-9966810 Caenorhabditis elegans
Exon194227   146   V: 9966857-9967002 Caenorhabditis elegans
Exon194230   633   V: 9967296-9967928 Caenorhabditis elegans
Exon194233   1065   V: 9968186-9969250 Caenorhabditis elegans
Exon194236   750   V: 9969422-9970171 Caenorhabditis elegans
Exon194240   128   V: 9970415-9970542 Caenorhabditis elegans
Exon194243   909   V: 9970593-9971501 Caenorhabditis elegans
Exon194247   283   V: 9971674-9971956 Caenorhabditis elegans
Exon194249   45   V: 9972074-9972118 Caenorhabditis elegans
Exon194252   152   V: 9972591-9972742 Caenorhabditis elegans
Exon194253   67   V: 9975010-9975076 Caenorhabditis elegans
Exon194254   786   V: 9975453-9976238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.1a.1 9966380 9976238 -1

1 Sequence

Length
5395

1 Sequence Ontology Term

Identifier Name Description
transcript