WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H6.1c.1 Sequence Name  C27H6.1c.1
Length (nt)  3963   Chromosome Location  V: 9966681-9971875
Chromosome . Primary Identifier  V Chromosome Location . Start  9966681
Chromosome Location . End  9971875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H6.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006777 unc-41 C27H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H6.1c C27H6.1c 3963   V: 9966681-9966810

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.1c.1 9966681 9971875 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194226   130   V: 9966681-9966810 Caenorhabditis elegans
Exon194229   146   V: 9966857-9967002 Caenorhabditis elegans
Exon194232   633   V: 9967296-9967928 Caenorhabditis elegans
Exon194235   1065   V: 9968186-9969250 Caenorhabditis elegans
Exon194238   750   V: 9969422-9970171 Caenorhabditis elegans
Exon194242   128   V: 9970415-9970542 Caenorhabditis elegans
Exon194245   909   V: 9970593-9971501 Caenorhabditis elegans
Exon194246   202   V: 9971674-9971875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.1c.1 9966681 9971875 -1

1 Sequence

Length
3963

1 Sequence Ontology Term

Identifier Name Description
transcript