WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27H6.4a.1 Sequence Name  C27H6.4a.1
Length (nt)  1108   Chromosome Location  V: 9983919-9985701
Chromosome . Primary Identifier  V Chromosome Location . Start  9983919
Chromosome Location . End  9985701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27H6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007786 rmd-2 C27H6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27H6.4a C27H6.4a 819   V: 9984064-9984669

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.4a.1 9983919 9985701 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194269   751   V: 9983919-9984669 Caenorhabditis elegans
Exon194273   93   V: 9984723-9984815 Caenorhabditis elegans
Exon194275   58   V: 9985338-9985395 Caenorhabditis elegans
Exon194277   206   V: 9985496-9985701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27H6.4a.1 9983919 9985701 -1

1 Sequence

Length
1108

1 Sequence Ontology Term

Identifier Name Description
transcript