WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08H10.7.1 Sequence Name  K08H10.7.1
Length (nt)  3218   Chromosome Location  V: 9987916-9991642
Chromosome . Primary Identifier  V Chromosome Location . Start  9987916
Chromosome Location . End  9991642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08H10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004323 rde-1 K08H10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08H10.7 K08H10.7 3063   V: 9988043-9988264

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.7.1 9987916 9991642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194306   349   V: 9987916-9988264 Caenorhabditis elegans
Exon194307   483   V: 9988341-9988823 Caenorhabditis elegans
Exon194308   609   V: 9988885-9989493 Caenorhabditis elegans
Exon194309   115   V: 9989538-9989652 Caenorhabditis elegans
Exon194310   612   V: 9989693-9990304 Caenorhabditis elegans
Exon194311   217   V: 9990351-9990567 Caenorhabditis elegans
Exon194312   179   V: 9990615-9990793 Caenorhabditis elegans
Exon194313   56   V: 9990848-9990903 Caenorhabditis elegans
Exon194314   313   V: 9990948-9991260 Caenorhabditis elegans
Exon194315   200   V: 9991303-9991502 Caenorhabditis elegans
Exon194316   85   V: 9991558-9991642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.7.1 9987916 9991642 -1

1 Sequence

Length
3218

1 Sequence Ontology Term

Identifier Name Description
transcript