WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08H10.1k.1 Sequence Name  K08H10.1k.1
Length (nt)  4194   Chromosome Location  V: 10011923-10027720
Chromosome . Primary Identifier  V Chromosome Location . Start  10011923
Chromosome Location . End  10027720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08H10.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002263 lea-1 K08H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08H10.1k K08H10.1k 4194   V: 10011923-10011961

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.1k.1 10011923 10027720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194356   39   V: 10011923-10011961 Caenorhabditis elegans
Exon194359   207   V: 10013265-10013471 Caenorhabditis elegans
Exon194374   114   V: 10020545-10020658 Caenorhabditis elegans
Exon194392   783   V: 10020703-10021485 Caenorhabditis elegans
Exon194407   567   V: 10021534-10022100 Caenorhabditis elegans
Exon194422   339   V: 10022196-10022534 Caenorhabditis elegans
Exon194431   372   V: 10022677-10023048 Caenorhabditis elegans
Exon194444   1341   V: 10023559-10024899 Caenorhabditis elegans
Exon194460   66   V: 10024954-10025019 Caenorhabditis elegans
Exon194470   177   V: 10025535-10025711 Caenorhabditis elegans
Exon194481   81   V: 10026461-10026541 Caenorhabditis elegans
Exon194491   108   V: 10027613-10027720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08H10.1k.1 10011923 10027720 1

1 Sequence

Length
4194

1 Sequence Ontology Term

Identifier Name Description
transcript