WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06E8.1a.1 Sequence Name  T06E8.1a.1
Length (nt)  1068   Chromosome Location  V: 10028150-10031092
Chromosome . Primary Identifier  V Chromosome Location . Start  10028150
Chromosome Location . End  10031092 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06E8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011543 acl-2 T06E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06E8.1a T06E8.1a 849   V: 10028359-10028499

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06E8.1a.1 10028150 10031092 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194482   350   V: 10028150-10028499 Caenorhabditis elegans
Exon194485   303   V: 10028880-10029182 Caenorhabditis elegans
Exon194486   108   V: 10029450-10029557 Caenorhabditis elegans
Exon194487   123   V: 10030553-10030675 Caenorhabditis elegans
Exon194488   184   V: 10030909-10031092 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06E8.1a.1 10028150 10031092 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript