WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57A8.3c.1 Sequence Name  F57A8.3c.1
Length (nt)  960   Chromosome Location  V: 10052155-10053873
Chromosome . Primary Identifier  V Chromosome Location . Start  10052155
Chromosome Location . End  10053873 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57A8.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006169 str-118 F57A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57A8.3c F57A8.3c 960   V: 10052155-10052446

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57A8.3c.1 10052155 10053873 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194517   292   V: 10052155-10052446 Caenorhabditis elegans
Exon194520   79   V: 10052491-10052569 Caenorhabditis elegans
Exon194523   135   V: 10052611-10052745 Caenorhabditis elegans
Exon194526   67   V: 10052794-10052860 Caenorhabditis elegans
Exon194529   84   V: 10052955-10053038 Caenorhabditis elegans
Exon194532   243   V: 10053527-10053769 Caenorhabditis elegans
Exon194536   60   V: 10053814-10053873 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57A8.3c.1 10052155 10053873 1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
transcript