WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57A8.4.1 Sequence Name  F57A8.4.1
Length (nt)  1878   Chromosome Location  V: 10067069-10069440
Chromosome . Primary Identifier  V Chromosome Location . Start  10067069
Chromosome Location . End  10069440 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57A8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010179 npr-39 F57A8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57A8.4 F57A8.4 1191   V: 10067087-10067242

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57A8.4.1 10067069 10069440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194547   174   V: 10067069-10067242 Caenorhabditis elegans
Exon194548   67   V: 10067292-10067358 Caenorhabditis elegans
Exon194549   129   V: 10067429-10067557 Caenorhabditis elegans
Exon194550   91   V: 10067608-10067698 Caenorhabditis elegans
Exon194551   498   V: 10067934-10068431 Caenorhabditis elegans
Exon194552   102   V: 10068477-10068578 Caenorhabditis elegans
Exon194553   817   V: 10068624-10069440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57A8.4.1 10067069 10069440 1

1 Sequence

Length
1878

1 Sequence Ontology Term

Identifier Name Description
transcript