WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04B5.4b Sequence Name  R04B5.4b
Length (nt)  1371   Chromosome Location  V: 10082245-10082349
Chromosome . Primary Identifier  V Chromosome Location . Start  10082245
Chromosome Location . End  10082349
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04B5.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40989 NHR-12, isoform b 52.4 456 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00051225
WBRNAi00034576
WBRNAi00062532
WBRNAi00084689
WBRNAi00084698

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04B5.4b 10082245 10082349 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003611 nhr-12 R04B5.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04B5.4b 10082245 10082349 -1
CDS:R04B5.4b 10082415 10082694 -1
CDS:R04B5.4b 10082745 10082859 -1
CDS:R04B5.4b 10082921 10083511 -1
CDS:R04B5.4b 10083558 10083643 -1
CDS:R04B5.4b 10083829 10084022 -1

1 Sequence

Length
1371

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04B5.4b.1 R04B5.4b.1 1510   V: 10082133-10084049