WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04B5.6.1 Sequence Name  R04B5.6.1
Length (nt)  1487   Chromosome Location  V: 10085164-10087363
Chromosome . Primary Identifier  V Chromosome Location . Start  10085164
Chromosome Location . End  10087363 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011004 R04B5.6 R04B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04B5.6 R04B5.6 1044   V: 10085281-10085466

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04B5.6.1 10085164 10087363 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194601   303   V: 10085164-10085466 Caenorhabditis elegans
Exon194602   227   V: 10085655-10085881 Caenorhabditis elegans
Exon194603   249   V: 10085934-10086182 Caenorhabditis elegans
Exon194604   115   V: 10086232-10086346 Caenorhabditis elegans
Exon194605   122   V: 10086392-10086513 Caenorhabditis elegans
Exon194606   471   V: 10086893-10087363 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04B5.6.1 10085164 10087363 1

1 Sequence

Length
1487

1 Sequence Ontology Term

Identifier Name Description
transcript