WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04B5.5.1 Sequence Name  R04B5.5.1
Length (nt)  1137   Chromosome Location  V: 10087480-10089002
Chromosome . Primary Identifier  V Chromosome Location . Start  10087480
Chromosome Location . End  10089002 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011003 R04B5.5 R04B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04B5.5 R04B5.5 1044   V: 10087489-10087674

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04B5.5.1 10087480 10089002 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194607   195   V: 10087480-10087674 Caenorhabditis elegans
Exon194608   227   V: 10087724-10087950 Caenorhabditis elegans
Exon194609   249   V: 10088001-10088249 Caenorhabditis elegans
Exon194610   115   V: 10088297-10088411 Caenorhabditis elegans
Exon194611   122   V: 10088457-10088578 Caenorhabditis elegans
Exon194612   229   V: 10088774-10089002 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04B5.5.1 10087480 10089002 1

1 Sequence

Length
1137

1 Sequence Ontology Term

Identifier Name Description
transcript