WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.1a.1 Sequence Name  C08B6.1a.1
Length (nt)  1663   Chromosome Location  V: 10102592-10104913
Chromosome . Primary Identifier  V Chromosome Location . Start  10102592
Chromosome Location . End  10104913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007422 ugt-17 C08B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.1a C08B6.1a 1611   V: 10102629-10103048

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.1a.1 10102592 10104913 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194637   457   V: 10102592-10103048 Caenorhabditis elegans
Exon194639   86   V: 10103100-10103185 Caenorhabditis elegans
Exon194641   522   V: 10103495-10104016 Caenorhabditis elegans
Exon194643   111   V: 10104067-10104177 Caenorhabditis elegans
Exon194645   90   V: 10104328-10104417 Caenorhabditis elegans
Exon194647   226   V: 10104470-10104695 Caenorhabditis elegans
Exon194649   171   V: 10104743-10104913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.1a.1 10102592 10104913 -1

1 Sequence

Length
1663

1 Sequence Ontology Term

Identifier Name Description
transcript