WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.1b.1 Sequence Name  C08B6.1b.1
Length (nt)  1718   Chromosome Location  V: 10102600-10104964
Chromosome . Primary Identifier  V Chromosome Location . Start  10102600
Chromosome Location . End  10104964 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007422 ugt-17 C08B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.1b C08B6.1b 1623   V: 10102629-10103060

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.1b.1 10102600 10104964 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194638   461   V: 10102600-10103060 Caenorhabditis elegans
Exon194640   86   V: 10103100-10103185 Caenorhabditis elegans
Exon194642   522   V: 10103495-10104016 Caenorhabditis elegans
Exon194644   111   V: 10104067-10104177 Caenorhabditis elegans
Exon194646   90   V: 10104328-10104417 Caenorhabditis elegans
Exon194648   226   V: 10104470-10104695 Caenorhabditis elegans
Exon194650   222   V: 10104743-10104964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.1b.1 10102600 10104964 -1

1 Sequence

Length
1718

1 Sequence Ontology Term

Identifier Name Description
transcript