WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.11.2 Sequence Name  C08B6.11.2
Length (nt)  1721   Chromosome Location  V: 10107626-10109926
Chromosome . Primary Identifier  V Chromosome Location . Start  10107626
Chromosome Location . End  10109926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.11.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007431 C08B6.11 C08B6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.11 C08B6.11 1584   V: 10107789-10107819

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.11.2 10107626 10109926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194690   75   V: 10107626-10107700 Caenorhabditis elegans
Exon194691   65   V: 10107755-10107819 Caenorhabditis elegans
Exon194693   173   V: 10107870-10108042 Caenorhabditis elegans
Exon194695   268   V: 10108105-10108372 Caenorhabditis elegans
Exon194697   135   V: 10108427-10108561 Caenorhabditis elegans
Exon194699   92   V: 10108605-10108696 Caenorhabditis elegans
Exon194701   91   V: 10108789-10108879 Caenorhabditis elegans
Exon194703   123   V: 10108925-10109047 Caenorhabditis elegans
Exon194705   248   V: 10109098-10109345 Caenorhabditis elegans
Exon194707   451   V: 10109476-10109926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.11.2 10107626 10109926 1

1 Sequence

Length
1721

1 Sequence Ontology Term

Identifier Name Description
transcript