WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.4a.1 Sequence Name  C08B6.4a.1
Length (nt)  1487   Chromosome Location  V: 10115580-10117339
Chromosome . Primary Identifier  V Chromosome Location . Start  10115580
Chromosome Location . End  10117339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007425 cht-5 C08B6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.4a C08B6.4a 1344   V: 10115596-10115644

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.4a.1 10115580 10117339 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194700   65   V: 10115580-10115644 Caenorhabditis elegans
Exon194701   287   V: 10115695-10115981 Caenorhabditis elegans
Exon194703   95   V: 10116039-10116133 Caenorhabditis elegans
Exon194705   656   V: 10116225-10116880 Caenorhabditis elegans
Exon194707   384   V: 10116956-10117339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.4a.1 10115580 10117339 1

1 Sequence

Length
1487

1 Sequence Ontology Term

Identifier Name Description
transcript