WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.7b.2 Sequence Name  C08B6.7b.2
Length (nt)  2694   Chromosome Location  V: 10130401-10133966
Chromosome . Primary Identifier  V Chromosome Location . Start  10130401
Chromosome Location . End  10133966 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.7b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007428 wdr-20 C08B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.7b C08B6.7b 2307   V: 10130768-10130877

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7b.2 10130401 10133966 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194741   477   V: 10130401-10130877 Caenorhabditis elegans
Exon194748   282   V: 10130931-10131212 Caenorhabditis elegans
Exon194753   107   V: 10131344-10131450 Caenorhabditis elegans
Exon194758   766   V: 10131496-10132261 Caenorhabditis elegans
Exon194763   205   V: 10132309-10132513 Caenorhabditis elegans
Exon194768   128   V: 10132565-10132692 Caenorhabditis elegans
Exon194773   140   V: 10132737-10132876 Caenorhabditis elegans
Exon194778   114   V: 10132979-10133092 Caenorhabditis elegans
Exon194783   68   V: 10133136-10133203 Caenorhabditis elegans
Exon194788   305   V: 10133287-10133591 Caenorhabditis elegans
Exon194793   102   V: 10133865-10133966 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7b.2 10130401 10133966 -1

1 Sequence

Length
2694

1 Sequence Ontology Term

Identifier Name Description
transcript