WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.7a.2 Sequence Name  C08B6.7a.2
Length (nt)  2772   Chromosome Location  V: 10130401-10134123
Chromosome . Primary Identifier  V Chromosome Location . Start  10130401
Chromosome Location . End  10134123 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007428 wdr-20 C08B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.7a C08B6.7a 2205   V: 10130878-10130885

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7a.2 10130401 10134123 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194742   485   V: 10130401-10130885 Caenorhabditis elegans
Exon194746   282   V: 10130931-10131212 Caenorhabditis elegans
Exon194751   107   V: 10131344-10131450 Caenorhabditis elegans
Exon194756   766   V: 10131496-10132261 Caenorhabditis elegans
Exon194761   205   V: 10132309-10132513 Caenorhabditis elegans
Exon194766   128   V: 10132565-10132692 Caenorhabditis elegans
Exon194771   140   V: 10132737-10132876 Caenorhabditis elegans
Exon194776   114   V: 10132979-10133092 Caenorhabditis elegans
Exon194781   68   V: 10133136-10133203 Caenorhabditis elegans
Exon194786   305   V: 10133287-10133591 Caenorhabditis elegans
Exon194794   109   V: 10133865-10133973 Caenorhabditis elegans
Exon194795   63   V: 10134061-10134123 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7a.2 10130401 10134123 -1

1 Sequence

Length
2772

1 Sequence Ontology Term

Identifier Name Description
transcript