WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08B6.7b.1 Sequence Name  C08B6.7b.1
Length (nt)  2785   Chromosome Location  V: 10130405-10134158
Chromosome . Primary Identifier  V Chromosome Location . Start  10130405
Chromosome Location . End  10134158 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08B6.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007428 wdr-20 C08B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08B6.7b C08B6.7b 2307   V: 10130768-10130877

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7b.1 10130405 10134158 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194744   473   V: 10130405-10130877 Caenorhabditis elegans
Exon194747   282   V: 10130931-10131212 Caenorhabditis elegans
Exon194752   107   V: 10131344-10131450 Caenorhabditis elegans
Exon194757   766   V: 10131496-10132261 Caenorhabditis elegans
Exon194762   205   V: 10132309-10132513 Caenorhabditis elegans
Exon194767   128   V: 10132565-10132692 Caenorhabditis elegans
Exon194772   140   V: 10132737-10132876 Caenorhabditis elegans
Exon194777   114   V: 10132979-10133092 Caenorhabditis elegans
Exon194782   68   V: 10133136-10133203 Caenorhabditis elegans
Exon194787   305   V: 10133287-10133591 Caenorhabditis elegans
Exon194792   99   V: 10133865-10133963 Caenorhabditis elegans
Exon194797   98   V: 10134061-10134158 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08B6.7b.1 10130405 10134158 -1

1 Sequence

Length
2785

1 Sequence Ontology Term

Identifier Name Description
transcript