WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C51E3.7a Sequence Name  C51E3.7a
Length (nt)  1959   Chromosome Location  V: 10169781-10169930
Chromosome . Primary Identifier  V Chromosome Location . Start  10169781
Chromosome Location . End  10169930
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C51E3.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08940 EGL-3, isoform a 72.0 652 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00089847
WBRNAi00042994
WBRNAi00012273
WBRNAi00027620
WBRNAi00114351
WBRNAi00114360
WBRNAi00065286
WBRNAi00081995
WBRNAi00081997
WBRNAi00081996
WBRNAi00081998
WBRNAi00060334
WBRNAi00060335
WBRNAi00060336
WBRNAi00060337
WBRNAi00060338
WBRNAi00060339
WBRNAi00060341
WBRNAi00060340
WBRNAi00060342
WBRNAi00089015
WBRNAi00089926
WBRNAi00090086
WBRNAi00090244
WBRNAi00090393
WBRNAi00090440
WBRNAi00090487
WBRNAi00090534
WBRNAi00114342

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C51E3.7a 10169781 10169930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C51E3.7a 10169781 10169930 -1
CDS:C51E3.7a 10170150 10170444 -1
CDS:C51E3.7a 10170510 10170968 -1
CDS:C51E3.7a 10171021 10171511 -1
CDS:C51E3.7a 10171917 10172009 -1
CDS:C51E3.7a 10172060 10172113 -1
CDS:C51E3.7a 10172624 10172764 -1
CDS:C51E3.7a 10173476 10173751 -1

1 Sequence

Length
1959

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C51E3.7a.1 C51E3.7a.1 2565   V: 10169177-10173753