WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK856.1.1 Sequence Name  ZK856.1.1
Length (nt)  2589   Chromosome Location  V: 10179535-10183154
Chromosome . Primary Identifier  V Chromosome Location . Start  10179535
Chromosome Location . End  10183154 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK856.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000840 cul-5 ZK856.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK856.1 ZK856.1 2298   V: 10179565-10179627

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK856.1.1 10179535 10183154 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194894   93   V: 10179535-10179627 Caenorhabditis elegans
Exon194895   135   V: 10179673-10179807 Caenorhabditis elegans
Exon194896   102   V: 10180186-10180287 Caenorhabditis elegans
Exon194897   205   V: 10180335-10180539 Caenorhabditis elegans
Exon194898   110   V: 10180586-10180695 Caenorhabditis elegans
Exon194899   208   V: 10180743-10180950 Caenorhabditis elegans
Exon194900   131   V: 10180997-10181127 Caenorhabditis elegans
Exon194901   297   V: 10181177-10181473 Caenorhabditis elegans
Exon194902   201   V: 10181520-10181720 Caenorhabditis elegans
Exon194903   61   V: 10181763-10181823 Caenorhabditis elegans
Exon194904   104   V: 10181870-10181973 Caenorhabditis elegans
Exon194905   72   V: 10182019-10182090 Caenorhabditis elegans
Exon194906   165   V: 10182138-10182302 Caenorhabditis elegans
Exon194907   392   V: 10182405-10182796 Caenorhabditis elegans
Exon194908   313   V: 10182842-10183154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK856.1.1 10179535 10183154 1

1 Sequence

Length
2589

1 Sequence Ontology Term

Identifier Name Description
transcript