WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C12D8.1b.2 Sequence Name  C12D8.1b.2
Length (nt)  2123   Chromosome Location  V: 10236158-10238818
Chromosome . Primary Identifier  V Chromosome Location . Start  10236158
Chromosome Location . End  10238818 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D8.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007534 fubl-1 C12D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D8.1b C12D8.1b 1836   V: 10236274-10236505

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12D8.1b.2 10236158 10238818 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195031   348   V: 10236158-10236505 Caenorhabditis elegans
Exon195037   584   V: 10236555-10237138 Caenorhabditis elegans
Exon195042   477   V: 10237183-10237659 Caenorhabditis elegans
Exon195048   636   V: 10237708-10238343 Caenorhabditis elegans
Exon195052   78   V: 10238741-10238818 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12D8.1b.2 10236158 10238818 -1

1 Sequence

Length
2123

1 Sequence Ontology Term

Identifier Name Description
transcript