WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y22F5A.2 Sequence Name  Y22F5A.2
Length (nt)  1041   Chromosome Location  V: 10258661-10258729
Chromosome . Primary Identifier  V Chromosome Location . Start  10258661
Chromosome Location . End  10258729
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22F5A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33726 SRI-18 39.1 346 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055689
WBRNAi00020120
WBRNAi00036712

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y22F5A.2 10258661 10258729 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005530 sri-18 Y22F5A.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y22F5A.2 10258661 10258729 -1
CDS:Y22F5A.2 10258773 10258912 -1
CDS:Y22F5A.2 10259105 10259183 -1
CDS:Y22F5A.2 10259240 10259485 -1
CDS:Y22F5A.2 10259528 10259656 -1
CDS:Y22F5A.2 10259701 10259919 -1
CDS:Y22F5A.2 10260396 10260554 -1

1 Sequence

Length
1041

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y22F5A.2.1 Y22F5A.2.1 1896   V: 10257812-10260560