WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22F5A.5.1 Sequence Name  Y22F5A.5.1
Length (nt)  931   Chromosome Location  V: 10280307-10281474
Chromosome . Primary Identifier  V Chromosome Location . Start  10280307
Chromosome Location . End  10281474 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22F5A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22F5A.5 Y22F5A.5 840   V: 10280368-10280781

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22F5A.5.1 10280307 10281474 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195141   475   V: 10280307-10280781 Caenorhabditis elegans
Exon195142   456   V: 10281019-10281474 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22F5A.5.1 10280307 10281474 -1

1 Sequence

Length
931

1 Sequence Ontology Term

Identifier Name Description
transcript