WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0024.6a.1 Sequence Name  B0024.6a.1
Length (nt)  3249   Chromosome Location  V: 10308291-10314053
Chromosome . Primary Identifier  V Chromosome Location . Start  10308291
Chromosome Location . End  10314053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0024.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001533 gcy-6 B0024.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0024.6a B0024.6a 3249   V: 10308291-10308374

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0024.6a.1 10308291 10314053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195230   84   V: 10308291-10308374 Caenorhabditis elegans
Exon195232   92   V: 10308425-10308516 Caenorhabditis elegans
Exon195234   99   V: 10308571-10308669 Caenorhabditis elegans
Exon195236   604   V: 10310054-10310657 Caenorhabditis elegans
Exon195238   89   V: 10310700-10310788 Caenorhabditis elegans
Exon195240   150   V: 10310833-10310982 Caenorhabditis elegans
Exon195242   322   V: 10311063-10311384 Caenorhabditis elegans
Exon195244   286   V: 10311431-10311716 Caenorhabditis elegans
Exon195246   334   V: 10311764-10312097 Caenorhabditis elegans
Exon195248   136   V: 10312180-10312315 Caenorhabditis elegans
Exon195250   120   V: 10312363-10312482 Caenorhabditis elegans
Exon195252   113   V: 10312532-10312644 Caenorhabditis elegans
Exon195254   132   V: 10312691-10312822 Caenorhabditis elegans
Exon195256   227   V: 10312870-10313096 Caenorhabditis elegans
Exon195258   133   V: 10313272-10313404 Caenorhabditis elegans
Exon195260   110   V: 10313457-10313566 Caenorhabditis elegans
Exon195262   110   V: 10313731-10313840 Caenorhabditis elegans
Exon195265   54   V: 10313893-10313946 Caenorhabditis elegans
Exon195266   54   V: 10314000-10314053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0024.6a.1 10308291 10314053 -1

1 Sequence

Length
3249

1 Sequence Ontology Term

Identifier Name Description
transcript