WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0024.6a.1 Sequence Name  B0024.6a.1
Length (nt)  3249   Chromosome Location  V: 10308291-10314053
Chromosome . Primary Identifier  V Chromosome Location . Start  10308291
Chromosome Location . End  10314053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0024.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001533 gcy-6 B0024.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0024.6a B0024.6a 3249   V: 10308291-10308374

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0024.6a.1 10308291 10314053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195252   84   V: 10308291-10308374 Caenorhabditis elegans
Exon195253   92   V: 10308425-10308516 Caenorhabditis elegans
Exon195255   99   V: 10308571-10308669 Caenorhabditis elegans
Exon195257   604   V: 10310054-10310657 Caenorhabditis elegans
Exon195259   89   V: 10310700-10310788 Caenorhabditis elegans
Exon195261   150   V: 10310833-10310982 Caenorhabditis elegans
Exon195263   322   V: 10311063-10311384 Caenorhabditis elegans
Exon195265   286   V: 10311431-10311716 Caenorhabditis elegans
Exon195267   334   V: 10311764-10312097 Caenorhabditis elegans
Exon195269   136   V: 10312180-10312315 Caenorhabditis elegans
Exon195271   120   V: 10312363-10312482 Caenorhabditis elegans
Exon195273   113   V: 10312532-10312644 Caenorhabditis elegans
Exon195275   132   V: 10312691-10312822 Caenorhabditis elegans
Exon195277   227   V: 10312870-10313096 Caenorhabditis elegans
Exon195279   133   V: 10313272-10313404 Caenorhabditis elegans
Exon195281   110   V: 10313457-10313566 Caenorhabditis elegans
Exon195283   110   V: 10313731-10313840 Caenorhabditis elegans
Exon195286   54   V: 10313893-10313946 Caenorhabditis elegans
Exon195287   54   V: 10314000-10314053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0024.6a.1 10308291 10314053 -1

1 Sequence

Length
3249

1 Sequence Ontology Term

Identifier Name Description
transcript