WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07C5.3.1 Sequence Name  K07C5.3.1
Length (nt)  1617   Chromosome Location  V: 10343032-10345489
Chromosome . Primary Identifier  V Chromosome Location . Start  10343032
Chromosome Location . End  10345489 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010626 K07C5.3 K07C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C5.3 K07C5.3 1482   V: 10343032-10343121

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.3.1 10343032 10345489 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195398   90   V: 10343032-10343121 Caenorhabditis elegans
Exon195399   414   V: 10343172-10343585 Caenorhabditis elegans
Exon195400   82   V: 10343634-10343715 Caenorhabditis elegans
Exon195401   107   V: 10343890-10343996 Caenorhabditis elegans
Exon195402   353   V: 10344043-10344395 Caenorhabditis elegans
Exon195403   120   V: 10344445-10344564 Caenorhabditis elegans
Exon195404   249   V: 10344659-10344907 Caenorhabditis elegans
Exon195405   202   V: 10345288-10345489 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.3.1 10343032 10345489 1

1 Sequence

Length
1617

1 Sequence Ontology Term

Identifier Name Description
transcript