WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07C5.4.1 Sequence Name  K07C5.4.1
Length (nt)  1624   Chromosome Location  V: 10350466-10352978
Chromosome . Primary Identifier  V Chromosome Location . Start  10350466
Chromosome Location . End  10352978 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07C5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010627 nol-56 K07C5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C5.4 K07C5.4 1461   V: 10350618-10350758

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.4.1 10350466 10352978 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195410   293   V: 10350466-10350758 Caenorhabditis elegans
Exon195412   275   V: 10350939-10351213 Caenorhabditis elegans
Exon195414   333   V: 10351383-10351715 Caenorhabditis elegans
Exon195417   235   V: 10351895-10352129 Caenorhabditis elegans
Exon195418   108   V: 10352175-10352282 Caenorhabditis elegans
Exon195419   155   V: 10352364-10352518 Caenorhabditis elegans
Exon195420   115   V: 10352569-10352683 Caenorhabditis elegans
Exon195422   110   V: 10352869-10352978 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.4.1 10350466 10352978 -1

1 Sequence

Length
1624

1 Sequence Ontology Term

Identifier Name Description
transcript