WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07C5.8b Sequence Name  K07C5.8b
Length (nt)  2046   Chromosome Location  V: 10362325-10362381
Chromosome . Primary Identifier  V Chromosome Location . Start  10362325
Chromosome Location . End  10362381
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07C5.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53046 CASH-1, isoform b 75.6 681 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00050137
WBRNAi00073196
WBRNAi00073197
WBRNAi00073198
WBRNAi00034062
WBRNAi00094956

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07C5.8b 10362325 10362381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010631 cash-1 K07C5.8 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07C5.8b 10362325 10362381 1
CDS:K07C5.8b 10362430 10362537 1
CDS:K07C5.8b 10362583 10362769 1
CDS:K07C5.8b 10362813 10362991 1
CDS:K07C5.8b 10363044 10363096 1
CDS:K07C5.8b 10363144 10363582 1
CDS:K07C5.8b 10363632 10363977 1
CDS:K07C5.8b 10364454 10365001 1
CDS:K07C5.8b 10365051 10365179 1

1 Sequence

Length
2046

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07C5.8b.1 K07C5.8b.1 2865   V: 10362261-10365934