WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:AC3.1a Sequence Name  AC3.1a
Length (nt)  1068   Chromosome Location  V: 10368556-10368747
Chromosome . Primary Identifier  V Chromosome Location . Start  10368556
Chromosome Location . End  10368747
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39465 SRI-20, isoform a 40.9 355 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00038592

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:AC3.1a 10368556 10368747 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005532 sri-20 AC3.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:AC3.1a 10368556 10368747 1
CDS:AC3.1a 10368801 10368929 1
CDS:AC3.1a 10368980 10369198 1
CDS:AC3.1a 10369248 10369560 1
CDS:AC3.1a 10369606 10369720 1
CDS:AC3.1a 10369769 10369868 1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:AC3.1a.1 AC3.1a.1 1122   V: 10368556-10369922