WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07C5.5.1 Sequence Name  K07C5.5.1
Length (nt)  1397   Chromosome Location  V: 10356285-10357903
Chromosome . Primary Identifier  V Chromosome Location . Start  10356285
Chromosome Location . End  10357903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010628 ceeh-2 K07C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C5.5 K07C5.5 1068   V: 10356349-10356504

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.5.1 10356285 10357903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195482   220   V: 10356285-10356504 Caenorhabditis elegans
Exon195483   152   V: 10356552-10356703 Caenorhabditis elegans
Exon195484   167   V: 10356747-10356913 Caenorhabditis elegans
Exon195485   282   V: 10356961-10357242 Caenorhabditis elegans
Exon195486   576   V: 10357328-10357903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07C5.5.1 10356285 10357903 -1

1 Sequence

Length
1397

1 Sequence Ontology Term

Identifier Name Description
transcript