WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC3.5b.1 Sequence Name  AC3.5b.1
Length (nt)  2952   Chromosome Location  V: 10389542-10393356
Chromosome . Primary Identifier  V Chromosome Location . Start  10389542
Chromosome Location . End  10393356 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC3.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007071 AC3.5 AC3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC3.5b AC3.5b 2952   V: 10389542-10389591

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:AC3.5b.1 10389542 10393356 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195512   50   V: 10389542-10389591 Caenorhabditis elegans
Exon195514   120   V: 10389858-10389977 Caenorhabditis elegans
Exon195516   175   V: 10390177-10390351 Caenorhabditis elegans
Exon195518   461   V: 10390398-10390858 Caenorhabditis elegans
Exon195520   97   V: 10390909-10391005 Caenorhabditis elegans
Exon195522   121   V: 10391057-10391177 Caenorhabditis elegans
Exon195524   266   V: 10391254-10391519 Caenorhabditis elegans
Exon195526   201   V: 10391563-10391763 Caenorhabditis elegans
Exon195528   669   V: 10391806-10392474 Caenorhabditis elegans
Exon195530   221   V: 10392520-10392740 Caenorhabditis elegans
Exon195531   571   V: 10392786-10393356 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:AC3.5b.1 10389542 10393356 1

1 Sequence

Length
2952

1 Sequence Ontology Term

Identifier Name Description
transcript