WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC3.8.1 Sequence Name  AC3.8.1
Length (nt)  1690   Chromosome Location  V: 10398801-10401307
Chromosome . Primary Identifier  V Chromosome Location . Start  10398801
Chromosome Location . End  10401307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007073 ugt-2 AC3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC3.8 AC3.8 1596   V: 10398810-10398962

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:AC3.8.1 10398801 10401307 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195547   162   V: 10398801-10398962 Caenorhabditis elegans
Exon195548   69   V: 10399010-10399078 Caenorhabditis elegans
Exon195549   114   V: 10399231-10399344 Caenorhabditis elegans
Exon195550   43   V: 10399392-10399434 Caenorhabditis elegans
Exon195551   90   V: 10399700-10399789 Caenorhabditis elegans
Exon195552   108   V: 10399833-10399940 Caenorhabditis elegans
Exon195553   382   V: 10400016-10400397 Caenorhabditis elegans
Exon195554   140   V: 10400444-10400583 Caenorhabditis elegans
Exon195555   86   V: 10400635-10400720 Caenorhabditis elegans
Exon195556   233   V: 10400769-10401001 Caenorhabditis elegans
Exon195557   263   V: 10401045-10401307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:AC3.8.1 10398801 10401307 1

1 Sequence

Length
1690

1 Sequence Ontology Term

Identifier Name Description
transcript