WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32F6A.3.2 Sequence Name  Y32F6A.3.2
Length (nt)  2964   Chromosome Location  V: 10441974-10446472
Chromosome . Primary Identifier  V Chromosome Location . Start  10441974
Chromosome Location . End  10446472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32F6A.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012528 pap-1 Y32F6A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32F6A.3 Y32F6A.3 1968   V: 10442117-10442341

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32F6A.3.2 10441974 10446472 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195693   83   V: 10441974-10442056 Caenorhabditis elegans
Exon195697   235   V: 10442107-10442341 Caenorhabditis elegans
Exon195699   889   V: 10442647-10443535 Caenorhabditis elegans
Exon195702   326   V: 10443585-10443910 Caenorhabditis elegans
Exon195704   534   V: 10444536-10445069 Caenorhabditis elegans
Exon195707   897   V: 10445576-10446472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32F6A.3.2 10441974 10446472 1

1 Sequence

Length
2964

1 Sequence Ontology Term

Identifier Name Description
transcript