WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E12.4d.1 Sequence Name  F22E12.4d.1
Length (nt)  2569   Chromosome Location  V: 10468517-10476915
Chromosome . Primary Identifier  V Chromosome Location . Start  10468517
Chromosome Location . End  10476915 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E12.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E12.4d F22E12.4d 2109   V: 10468525-10468599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4d.1 10468517 10476915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195748   83   V: 10468517-10468599 Caenorhabditis elegans
Exon195756   129   V: 10468944-10469072 Caenorhabditis elegans
Exon195761   478   V: 10470400-10470877 Caenorhabditis elegans
Exon195767   194   V: 10470923-10471116 Caenorhabditis elegans
Exon195778   123   V: 10473680-10473802 Caenorhabditis elegans
Exon195785   84   V: 10473933-10474016 Caenorhabditis elegans
Exon195789   95   V: 10474093-10474187 Caenorhabditis elegans
Exon195795   746   V: 10474812-10475557 Caenorhabditis elegans
Exon195809   637   V: 10476279-10476915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4d.1 10468517 10476915 1

1 Sequence

Length
2569

1 Sequence Ontology Term

Identifier Name Description
transcript