WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E12.4b.2 Sequence Name  F22E12.4b.2
Length (nt)  3193   Chromosome Location  V: 10468519-10476915
Chromosome . Primary Identifier  V Chromosome Location . Start  10468519
Chromosome Location . End  10476915 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E12.4b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E12.4b F22E12.4b 1092   V: 10468525-10468599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4b.2 10468519 10476915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195750   81   V: 10468519-10468599 Caenorhabditis elegans
Exon195754   129   V: 10468944-10469072 Caenorhabditis elegans
Exon195759   478   V: 10470400-10470877 Caenorhabditis elegans
Exon195765   194   V: 10470923-10471116 Caenorhabditis elegans
Exon195775   123   V: 10473680-10473802 Caenorhabditis elegans
Exon195782   84   V: 10473933-10474016 Caenorhabditis elegans
Exon195797   2104   V: 10474812-10476915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4b.2 10468519 10476915 1

1 Sequence

Length
3193

1 Sequence Ontology Term

Identifier Name Description
transcript