WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E12.4b.3 Sequence Name  F22E12.4b.3
Length (nt)  2486   Chromosome Location  V: 10468525-10476915
Chromosome . Primary Identifier  V Chromosome Location . Start  10468525
Chromosome Location . End  10476915 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E12.4b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E12.4b F22E12.4b 1092   V: 10468525-10468599

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4b.3 10468525 10476915 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195751   75   V: 10468525-10468599 Caenorhabditis elegans
Exon195755   129   V: 10468944-10469072 Caenorhabditis elegans
Exon195760   478   V: 10470400-10470877 Caenorhabditis elegans
Exon195766   194   V: 10470923-10471116 Caenorhabditis elegans
Exon195776   123   V: 10473680-10473802 Caenorhabditis elegans
Exon195783   84   V: 10473933-10474016 Caenorhabditis elegans
Exon195791   332   V: 10474812-10475143 Caenorhabditis elegans
Exon195798   371   V: 10475187-10475557 Caenorhabditis elegans
Exon195801   63   V: 10475642-10475704 Caenorhabditis elegans
Exon195808   637   V: 10476279-10476915 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E12.4b.3 10468525 10476915 1

1 Sequence

Length
2486

1 Sequence Ontology Term

Identifier Name Description
transcript