WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F22E12.4c Sequence Name  F22E12.4c
Length (nt)  1398   Chromosome Location  V: 10473337-10473438
Chromosome . Primary Identifier  V Chromosome Location . Start  10473337
Chromosome Location . End  10473438
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E12.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38327 EGL-9, isoform c 52.9 465 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00089834
WBRNAi00001895
WBRNAi00045330
WBRNAi00013759
WBRNAi00098163
WBRNAi00093229
WBRNAi00093230
WBRNAi00084296
WBRNAi00092084
WBRNAi00103104
WBRNAi00092083
WBRNAi00092082
WBRNAi00089918
WBRNAi00090078
WBRNAi00090236
WBRNAi00084305
WBRNAi00084248
WBRNAi00117816

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F22E12.4c 10473337 10473438 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F22E12.4c 10473337 10473438 1
CDS:F22E12.4c 10473680 10473802 1
CDS:F22E12.4c 10473933 10474016 1
CDS:F22E12.4c 10474093 10474187 1
CDS:F22E12.4c 10474812 10475557 1
CDS:F22E12.4c 10475642 10475704 1
CDS:F22E12.4c 10476279 10476463 1

1 Sequence

Length
1398

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F22E12.4c.1 F22E12.4c.1 1850   V: 10473333-10476911