WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32F6B.2.1 Sequence Name  Y32F6B.2.1
Length (nt)  2133   Chromosome Location  V: 10486361-10490098
Chromosome . Primary Identifier  V Chromosome Location . Start  10486361
Chromosome Location . End  10490098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32F6B.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003570 ncx-5 Y32F6B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32F6B.2 Y32F6B.2 1971   V: 10486473-10486678

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32F6B.2.1 10486361 10490098 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195827   318   V: 10486361-10486678 Caenorhabditis elegans
Exon195828   322   V: 10486727-10487048 Caenorhabditis elegans
Exon195829   138   V: 10487129-10487266 Caenorhabditis elegans
Exon195830   200   V: 10487315-10487514 Caenorhabditis elegans
Exon195831   418   V: 10487562-10487979 Caenorhabditis elegans
Exon195832   167   V: 10488025-10488191 Caenorhabditis elegans
Exon195833   127   V: 10488280-10488406 Caenorhabditis elegans
Exon195834   167   V: 10488452-10488618 Caenorhabditis elegans
Exon195835   99   V: 10489617-10489715 Caenorhabditis elegans
Exon195836   177   V: 10489922-10490098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32F6B.2.1 10486361 10490098 -1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript