WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35A5.4.1 Sequence Name  C35A5.4.1
Length (nt)  1428   Chromosome Location  V: 10497033-10499416
Chromosome . Primary Identifier  V Chromosome Location . Start  10497033
Chromosome Location . End  10499416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35A5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007948 C35A5.4 C35A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35A5.4 C35A5.4 1284   V: 10497085-10497294

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35A5.4.1 10497033 10499416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195850   262   V: 10497033-10497294 Caenorhabditis elegans
Exon195851   183   V: 10497368-10497550 Caenorhabditis elegans
Exon195852   59   V: 10497833-10497891 Caenorhabditis elegans
Exon195853   152   V: 10497935-10498086 Caenorhabditis elegans
Exon195854   125   V: 10498353-10498477 Caenorhabditis elegans
Exon195855   210   V: 10498525-10498734 Caenorhabditis elegans
Exon195856   81   V: 10498791-10498871 Caenorhabditis elegans
Exon195857   69   V: 10498915-10498983 Caenorhabditis elegans
Exon195858   99   V: 10499040-10499138 Caenorhabditis elegans
Exon195859   66   V: 10499186-10499251 Caenorhabditis elegans
Exon195860   122   V: 10499295-10499416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35A5.4.1 10497033 10499416 1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
transcript