WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35A5.8.1 Sequence Name  C35A5.8.1
Length (nt)  3486   Chromosome Location  V: 10521994-10525908
Chromosome . Primary Identifier  V Chromosome Location . Start  10521994
Chromosome Location . End  10525908 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35A5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007952 xpo-7 C35A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35A5.8 C35A5.8 3291   V: 10522151-10522477

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35A5.8.1 10521994 10525908 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195904   484   V: 10521994-10522477 Caenorhabditis elegans
Exon195905   303   V: 10522525-10522827 Caenorhabditis elegans
Exon195906   406   V: 10522878-10523283 Caenorhabditis elegans
Exon195907   89   V: 10523335-10523423 Caenorhabditis elegans
Exon195908   68   V: 10523469-10523536 Caenorhabditis elegans
Exon195909   655   V: 10523579-10524233 Caenorhabditis elegans
Exon195910   462   V: 10524283-10524744 Caenorhabditis elegans
Exon195911   828   V: 10524795-10525622 Caenorhabditis elegans
Exon195912   138   V: 10525672-10525809 Caenorhabditis elegans
Exon195913   53   V: 10525856-10525908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35A5.8.1 10521994 10525908 -1

1 Sequence

Length
3486

1 Sequence Ontology Term

Identifier Name Description
transcript