WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25D1.2.1 Sequence Name  F25D1.2.1
Length (nt)  1179   Chromosome Location  V: 10530617-10532825
Chromosome . Primary Identifier  V Chromosome Location . Start  10530617
Chromosome Location . End  10532825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009107 txt-10 F25D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25D1.2 F25D1.2 1155   V: 10530641-10530779

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25D1.2.1 10530617 10532825 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon195925   163   V: 10530617-10530779 Caenorhabditis elegans
Exon195926   252   V: 10531156-10531407 Caenorhabditis elegans
Exon195927   149   V: 10531450-10531598 Caenorhabditis elegans
Exon195928   143   V: 10531643-10531785 Caenorhabditis elegans
Exon195929   236   V: 10532307-10532542 Caenorhabditis elegans
Exon195930   236   V: 10532590-10532825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25D1.2.1 10530617 10532825 -1

1 Sequence

Length
1179

1 Sequence Ontology Term

Identifier Name Description
transcript