WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C9.5a.1 Sequence Name  T21C9.5a.1
Length (nt)  554   Chromosome Location  V: 10579305-10580693
Chromosome . Primary Identifier  V Chromosome Location . Start  10579305
Chromosome Location . End  10580693 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003065 lpd-9 T21C9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C9.5a T21C9.5a 396   V: 10579322-10579392

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21C9.5a.1 10579305 10580693 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196127   88   V: 10579305-10579392 Caenorhabditis elegans
Exon196128   133   V: 10579807-10579939 Caenorhabditis elegans
Exon196131   333   V: 10580361-10580693 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21C9.5a.1 10579305 10580693 1

1 Sequence

Length
554

1 Sequence Ontology Term

Identifier Name Description
transcript