WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21C9.12b Sequence Name  T21C9.12b
Length (nt)  1356   Chromosome Location  V: 10599112-10599187
Chromosome . Primary Identifier  V Chromosome Location . Start  10599112
Chromosome Location . End  10599187
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C9.12b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53110 SCPL-4, isoform b 51.3 451 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00095734
WBRNAi00053716
WBRNAi00035750
WBRNAi00093682
WBRNAi00106908
WBRNAi00110746

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21C9.12b 10599112 10599187 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011897 scpl-4 T21C9.12 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21C9.12b 10599112 10599187 1
CDS:T21C9.12b 10599229 10599317 1
CDS:T21C9.12b 10599366 10599470 1
CDS:T21C9.12b 10599517 10599687 1
CDS:T21C9.12b 10599730 10599957 1
CDS:T21C9.12b 10600375 10600701 1
CDS:T21C9.12b 10600747 10600903 1
CDS:T21C9.12b 10601572 10601774 1

1 Sequence

Length
1356

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21C9.12b.1 T21C9.12b.1 1736   V: 10599104-10602146