WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27A22.1a.1 Sequence Name  H27A22.1a.1
Length (nt)  1218   Chromosome Location  V: 10604129-10605581
Chromosome . Primary Identifier  V Chromosome Location . Start  10604129
Chromosome Location . End  10605581 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27A22.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010418 H27A22.1 H27A22.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27A22.1a H27A22.1a 1029   V: 10604129-10604347

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27A22.1a.1 10604129 10605581 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196136   219   V: 10604129-10604347 Caenorhabditis elegans
Exon196137   353   V: 10604402-10604754 Caenorhabditis elegans
Exon196139   88   V: 10604805-10604892 Caenorhabditis elegans
Exon196141   214   V: 10604938-10605151 Caenorhabditis elegans
Exon196144   344   V: 10605238-10605581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27A22.1a.1 10604129 10605581 1

1 Sequence

Length
1218

1 Sequence Ontology Term

Identifier Name Description
transcript