WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32C4.3c.1 Sequence Name  C32C4.3c.1
Length (nt)  1183   Chromosome Location  V: 10645080-10646953
Chromosome . Primary Identifier  V Chromosome Location . Start  10645080
Chromosome Location . End  10646953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32C4.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007863 mdss-1 C32C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32C4.3c C32C4.3c 1098   V: 10645140-10645199

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32C4.3c.1 10645080 10646953 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196285   120   V: 10645080-10645199 Caenorhabditis elegans
Exon196287   93   V: 10645244-10645336 Caenorhabditis elegans
Exon196289   140   V: 10645432-10645571 Caenorhabditis elegans
Exon196291   222   V: 10645619-10645840 Caenorhabditis elegans
Exon196293   114   V: 10646214-10646327 Caenorhabditis elegans
Exon196295   105   V: 10646373-10646477 Caenorhabditis elegans
Exon196297   313   V: 10646521-10646833 Caenorhabditis elegans
Exon196298   76   V: 10646878-10646953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32C4.3c.1 10645080 10646953 -1

1 Sequence

Length
1183

1 Sequence Ontology Term

Identifier Name Description
transcript