WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29F11.1.1 Sequence Name  F29F11.1.1
Length (nt)  1581   Chromosome Location  V: 10659635-10661467
Chromosome . Primary Identifier  V Chromosome Location . Start  10659635
Chromosome Location . End  10661467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005022 sqv-4 F29F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29F11.1 F29F11.1 1446   V: 10659768-10660165

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29F11.1.1 10659635 10661467 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196344   531   V: 10659635-10660165 Caenorhabditis elegans
Exon196345   531   V: 10660324-10660854 Caenorhabditis elegans
Exon196346   340   V: 10660904-10661243 Caenorhabditis elegans
Exon196347   179   V: 10661289-10661467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29F11.1.1 10659635 10661467 -1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript