WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29F11.5a.1 Sequence Name  F29F11.5a.1
Length (nt)  2009   Chromosome Location  V: 10671918-10675644
Chromosome . Primary Identifier  V Chromosome Location . Start  10671918
Chromosome Location . End  10675644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29F11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000445 ceh-22 F29F11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29F11.5a F29F11.5a 1041   V: 10672634-10672845

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29F11.5a.1 10671918 10675644 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196365   928   V: 10671918-10672845 Caenorhabditis elegans
Exon196370   86   V: 10673894-10673979 Caenorhabditis elegans
Exon196374   90   V: 10674351-10674440 Caenorhabditis elegans
Exon196376   97   V: 10674499-10674595 Caenorhabditis elegans
Exon196381   237   V: 10674650-10674886 Caenorhabditis elegans
Exon196386   111   V: 10674968-10675078 Caenorhabditis elegans
Exon196394   460   V: 10675185-10675644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29F11.5a.1 10671918 10675644 1

1 Sequence

Length
2009

1 Sequence Ontology Term

Identifier Name Description
transcript