WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28H7.10a Sequence Name  F28H7.10a
Length (nt)  2553   Chromosome Location  V: 10764366-10764502
Chromosome . Primary Identifier  V Chromosome Location . Start  10764366
Chromosome Location . End  10764502
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28H7.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51877 OCR-1, isoform a 97.3 850 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00045878
WBRNAi00014080

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F28H7.10a 10764366 10764502 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003838 ocr-1 F28H7.10 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F28H7.10a 10764366 10764502 1
CDS:F28H7.10a 10764548 10764677 1
CDS:F28H7.10a 10764867 10764984 1
CDS:F28H7.10a 10765321 10765404 1
CDS:F28H7.10a 10765599 10765730 1
CDS:F28H7.10a 10765781 10765970 1
CDS:F28H7.10a 10766073 10766328 1
CDS:F28H7.10a 10766381 10766533 1
CDS:F28H7.10a 10766577 10766747 1
CDS:F28H7.10a 10766935 10767177 1
CDS:F28H7.10a 10767225 10767391 1
CDS:F28H7.10a 10767437 10767546 1
CDS:F28H7.10a 10767700 10768247 1
CDS:F28H7.10a 10768341 10768454 1

1 Sequence

Length
2553

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28H7.10a.1 F28H7.10a.1 2689   V: 10764366-10768590