WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1054.1.1 Sequence Name  D1054.1.1
Length (nt)  1142   Chromosome Location  V: 10768463-10770217
Chromosome . Primary Identifier  V Chromosome Location . Start  10768463
Chromosome Location . End  10770217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1054.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008370 D1054.1 D1054.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1054.1 D1054.1 801   V: 10768511-10768633

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1054.1.1 10768463 10770217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196558   171   V: 10768463-10768633 Caenorhabditis elegans
Exon196559   147   V: 10768678-10768824 Caenorhabditis elegans
Exon196560   129   V: 10769141-10769269 Caenorhabditis elegans
Exon196561   75   V: 10769315-10769389 Caenorhabditis elegans
Exon196562   106   V: 10769435-10769540 Caenorhabditis elegans
Exon196563   83   V: 10769597-10769679 Caenorhabditis elegans
Exon196564   92   V: 10769734-10769825 Caenorhabditis elegans
Exon196565   339   V: 10769879-10770217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1054.1.1 10768463 10770217 -1

1 Sequence

Length
1142

1 Sequence Ontology Term

Identifier Name Description
transcript